Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814423.1_cds_XP_016497916.1_12000
CDS Infomation

[gene=LOC107816691] [db_xref=GeneID:107816691] [protein=pentatricopeptide repeat-containing protein At1g60770-like] [protein_id=XP_016497916.1] [location=join(47874..48110,49141..50385)] [gbkey=CDS]
Sequence

ATGGCGTCGTTTATTCAGAAGTTCTCGTTGAAAACGAAGAACATTGGGAAAAGGGCTACG
AAGAAGTACTTGGAAGATGCACTTTACAAGAATCTGTTCAAGGAAGGAGGCGAAGAGAAC
CACGTTAGGAAAAATCTGAATCAATTCTTGAAATCCCACAAAAGTGCTTACAAATGGGAA
GTTGGAAAATCCCTCAAGGTCTTACGCCAACGCAAGCTTTACGCCCCAGCACTCAAGTTA
TCAGAAACAATGGAAAAAAGGGGCATGAACAAGACTATTAGTGATCAAGCTATACATCTG
GATCTTGTTGCCAAGAGTAAAGGGATTGAAGCAGCAGAGACTTATTTTTCGGATCTCCCA
GAGGCATCGAAAAATCTTCTCACCTATTCTGCTCTTCTGAATTGCTACTGCAAGGAATTA
ATGACTGAAAAAGCTGAGGCGCTGATGGAGAAAATGAAAGAACTTAACTTAGGTTTAAGC
TCCATGCCTTATAACAGCTTGATGACTCTCTACTCAAAAACTGGGCACCCAGAAAAAATT
CCAGCCATTATTCAAGAAATGAAGGCCTATGATGTAATGCCAGATTCTTACACCTACAAT
GTTTGGATGAGGGCTCTTTCTTCTATGAATGATATTTCTGGGGTCGAGAGGGTTATTGAT
GAAATGAAGAGAGATGGTCGTGTAGCTGATGATTGGACTACATATAGCAATTTAGCATCG
ATTTATGCAGATGCTGGCTTAACCGATAAAGCAGTGAAGGCACTCAAGGAACTGGAAAAG
AAAAATGCATGTCGCAATGTTACTGCTTACCAGTTTCTGATCACATTGTATGGCCGTGTT
GGAAATTTGTTGGAAGTATATCGTGTATGGCGTTCTTTGAGGCTTGCTTTTCCCGGAACG
GCAAACATAAACTATCTTAACATGATCCAAGTTTTGGTTAACTTGAATGACTTACCGGGT
GCTGAGAAATGCTTCAAGGAATGGGAATCTGGATGCCCAACTTATGACATACGTGTAGCA
AATGTTCTTATAGGAGCTTACACTAAACAAGGTTCTTTGGAGAAAGCTGAAGAGCTCAAG
GAACGGGCCCGAAGGAGCGGAGCTAAGCCTAATGCTAAGACATGGGAGATTTTCGGGGAT
TATTATCTGCAAAATGGGGATATCAAATCAGCAGTTGATTGTGTTGACAAGGCAATTTCA
ACTGGTAGAGGTGATGGTGGCAAGTGGGTTCCATCATCTGCTATCGTTAGAAAATTCATG
AGTCATTTTGAACAAAATAAAGATGTCGATGGTGCAGAACATTTTATGGAAATTTTGAAG
AAGGCTAAGGATGAGTTGGGGGTTGACATATTTGAATCTTTGATAAGAACTTATGTAGCT
TCTGGAAAAACAAGTCCTATCATGCGTCGGCGGATTAAAATGGAGAATATAGAGCTGAGC
GAAGAAGGTAAAAGATTGTTGGACTCCATCTCTGTGGAGTGA

Peptide Sequence

PEP ID

XP_016497916.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g60770-like [Nicotiana tabacum]
Sequence

MASFIQKFSLKTKNIGKRATKKYLEDALYKNLFKEGGEENHVRKNLNQFLKSHKSAYKWE
VGKSLKVLRQRKLYAPALKLSETMEKRGMNKTISDQAIHLDLVAKSKGIEAAETYFSDLP
EASKNLLTYSALLNCYCKELMTEKAEALMEKMKELNLGLSSMPYNSLMTLYSKTGHPEKI
PAIIQEMKAYDVMPDSYTYNVWMRALSSMNDISGVERVIDEMKRDGRVADDWTTYSNLAS
IYADAGLTDKAVKALKELEKKNACRNVTAYQFLITLYGRVGNLLEVYRVWRSLRLAFPGT
ANINYLNMIQVLVNLNDLPGAEKCFKEWESGCPTYDIRVANVLIGAYTKQGSLEKAEELK
ERARRSGAKPNAKTWEIFGDYYLQNGDIKSAVDCVDKAISTGRGDGGKWVPSSAIVRKFM
SHFEQNKDVDGAEHFMEILKKAKDELGVDIFESLIRTYVASGKTSPIMRRRIKMENIELS
EEGKRLLDSISVE

Transcript Sequence

Gene sequence data has not been registered.